PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

Plant Transcription Factor Database

v4.0

Previous version: v3.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100237220041

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

G2-like

Protein Properties

Length: 417aa MW: 46972.1 Da PI: 6.0828

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100237220041	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.9	1.8e-31	307	362	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH++F++a+++LGG++ AtPk+i+e+m+v+gLt+++vkSHLQkYRl+ Ote100237220041\|100237220041 307 KQRRCWSPELHAQFIDALQHLGGPQAATPKQIREHMQVDGLTNDEVKSHLQKYRLH 362 79****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	3.4E-17	304	365	IPR009057	Homeodomain-like
PROSITE profile	PS51294	14.062	304	364	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.2E-27	306	366	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	5.4E-26	307	362	IPR006447	Myb domain, plants
Pfam	PF00249	3.1E-8	309	360	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence Send to blast
TESSPFDPFI XXXXXXXDTS IHTDYRRREI LFINSVERDW RNLEDLVGKM GSPIHPKLGL 60 DCRFSPKQKP IGRFLADVSK IHAVSDRILK LDDYVNRLQD EMKKIDAFKR ELPLCMLLLS 120 DAISAAQEEL AEYRKLNSEP VLEQFMPLEK ICTDEKDEKV EDSTEKVMSS VDKKQWMSSV 180 QLQLWNGDDE NSNSNTAAYS SNKLSSNKKK KMGEEINQPL MDDLFGNEKQ RTFEPFKGCP 240 SFGVMAVGKG EMDDLPVPGL SLCTPGIKNS REAINPVGSS YSKSGSSPAT SNLQASFKSG 300 QVQTGRKQRR CWSPELHAQF IDALQHLGGP QAATPKQIRE HMQVDGLTND EVKSHLQKYR 360 LHMRRIASNS TSQPVTLWTS QEQFRDSLKQ STAQFGSPEG PLHLSRCPEG EGEDEDG

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence Send to blast

TESSPFDPFI XXXXXXXDTS IHTDYRRREI LFINSVERDW RNLEDLVGKM GSPIHPKLGL  60
DCRFSPKQKP IGRFLADVSK IHAVSDRILK LDDYVNRLQD EMKKIDAFKR ELPLCMLLLS  120
DAISAAQEEL AEYRKLNSEP VLEQFMPLEK ICTDEKDEKV EDSTEKVMSS VDKKQWMSSV  180
QLQLWNGDDE NSNSNTAAYS SNKLSSNKKK KMGEEINQPL MDDLFGNEKQ RTFEPFKGCP  240
SFGVMAVGKG EMDDLPVPGL SLCTPGIKNS REAINPVGSS YSKSGSSPAT SNLQASFKSG  300
QVQTGRKQRR CWSPELHAQF IDALQHLGGP QAATPKQIRE HMQVDGLTND EVKSHLQKYR  360
LHMRRIASNS TSQPVTLWTS QEQFRDSLKQ STAQFGSPEG PLHLSRCPEG EGEDEDG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011088301.1	1e-144	PREDICTED: uncharacterized protein LOC105169576
TrEMBL	A0A022RCD5	1e-114	A0A022RCD5_ERYGU; Uncharacterized protein
STRING	VIT_03s0063g01060.t01	2e-99	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4361	24	43